STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEV88492.1Two component transcriptional regulator, LuxR family. (203 aa)    
Predicted Functional Partners:
SEW19277.1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
 
 0.994
SEV88507.1
Signal transduction histidine kinase.
 0.988
SEV88522.1
ABC-2 type transport system ATP-binding protein.
 
    0.843
SEV88533.1
ABC-2 type transport system permease protein.
 
   
 0.825
SEV88547.1
ABC-2 type transport system permease protein.
 
   
 0.819
SEV85576.1
Tetratricopeptide repeat-containing protein.
    
 0.699
SEW01694.1
Signal transduction histidine kinase.
 
 0.669
SEV87408.1
Two-component system, OmpR family, bacitracin resistance sensor histidine kinase BceS.
 
 0.657
SEW00673.1
Hypothetical protein.
    
 0.640
SEW17798.1
His Kinase A (phospho-acceptor) domain-containing protein.
 
 0.611
Your Current Organism:
Aliicoccus persicus
NCBI taxonomy Id: 930138
Other names: A. persicus, Aliicoccus persicus Amoozegar et al. 2014, CECT 8508, DSM 28306, IBRC-M 10081, Jeotgalicoccus sp. A76(2010), strain A76
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.