STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEV92551.116S rRNA m(7)G-527 methyltransferase. (237 aa)    
Predicted Functional Partners:
SEV92573.1
tRNA uridine 5-carboxymethylaminomethyl modification enzyme.
 
  
 0.997
SEV92588.1
tRNA modification GTPase trmE.
  
  
 0.968
SEV92530.1
Effector of nucleoid occlusion Noc.
  
  
 0.949
SEV92622.1
Ribonuclease P protein component.
  
  
 0.812
SEV92603.1
spoIIIJ-associated protein.
  
  
 0.807
SEV81521.1
16S rRNA processing protein RimM.
 
   
 0.613
SEV92639.1
LSU ribosomal protein L34P.
  
  
 0.612
SEV92495.1
Chromosome partitioning protein, ParB family.
  
  
 0.606
SEW17246.1
Inosine-5'-monophosphate dehydrogenase.
     
 0.601
SEV85805.1
GTP pyrophosphokinase.
  
 
 0.538
Your Current Organism:
Aliicoccus persicus
NCBI taxonomy Id: 930138
Other names: A. persicus, Aliicoccus persicus Amoozegar et al. 2014, CECT 8508, DSM 28306, IBRC-M 10081, Jeotgalicoccus sp. A76(2010), strain A76
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.