STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEV94324.1Chorismate synthase. (360 aa)    
Predicted Functional Partners:
SEV93122.1
3-phosphoshikimate 1-carboxyvinyltransferase.
 
 0.999
SEW00003.1
Aminodeoxychorismate synthase, subunit I.
 
 
 0.989
SEV83594.1
3-dehydroquinate synthase.
  
 0.985
SEV82089.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
   
 
 0.982
SEV85415.1
Shikimate dehydrogenase.
 
 0.975
SEV99985.1
Aminodeoxychorismate synthase, glutamine amidotransferase subunit.
 
 
 0.974
SEV88181.1
Isochorismate synthase.
 
  
 0.968
SEV94337.1
3-deoxy-D-arabinoheptulosonate-7-phosphate synthase.
  
 
 0.964
SEW17167.1
3-deoxy-7-phosphoheptulonate synthase / chorismate mutase.
  
 
 0.964
SEW17120.1
Chorismate mutase / prephenate dehydratase.
 
  
 0.915
Your Current Organism:
Aliicoccus persicus
NCBI taxonomy Id: 930138
Other names: A. persicus, Aliicoccus persicus Amoozegar et al. 2014, CECT 8508, DSM 28306, IBRC-M 10081, Jeotgalicoccus sp. A76(2010), strain A76
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