STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEW01396.1Fe-S cluster assembly protein SufD. (438 aa)    
Predicted Functional Partners:
SEW01380.1
Iron-regulated ABC transporter ATPase subunit SufC.
 0.999
SEW01413.1
Cysteine desulfurase / selenocysteine lyase.
 
 0.988
SEW01425.1
FeS assembly scaffold apoprotein IscU /Modular FeS cluster scaffolding protein NifU.
 
  
 0.972
SEW01445.1
Iron-regulated ABC transporter membrane component SufB.
 
  
0.942
SEW08627.1
Selenocysteine lyase/Cysteine desulfurase.
  
 
 0.756
SEW01906.1
Iron-sulfur cluster assembly protein.
  
 
 0.615
SEW02365.1
Metal-sulfur cluster biosynthetic enzyme.
 
   
 0.530
SEV95937.1
Putative membrane protein.
       0.434
Your Current Organism:
Aliicoccus persicus
NCBI taxonomy Id: 930138
Other names: A. persicus, Aliicoccus persicus Amoozegar et al. 2014, CECT 8508, DSM 28306, IBRC-M 10081, Jeotgalicoccus sp. A76(2010), strain A76
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.