STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEW01544.1Lipoic acid synthetase. (308 aa)    
Predicted Functional Partners:
SEW19506.1
Lipoate-protein ligase.
 
 
 0.991
SEV84444.1
Lipoate-protein ligase A.
 
 
 0.932
SEW07209.1
octanoyl-[GcvH]:protein N-octanoyltransferase.
  
 
 0.924
SEW01273.1
Glycine cleavage system H protein.
   
 0.901
SEW01562.1
Uncharacterized protein YutD.
       0.813
SEW01520.1
2',3'-cyclic-nucleotide 2'-phosphodiesterase/5'-or 3'-nucleotidase, 5'-nucleotidase family.
       0.594
SEW01505.1
Hypothetical protein.
       0.590
SEW01492.1
Uncharacterized conserved protein YecE, DUF72 family.
       0.589
SEW01534.1
Transporter, NhaC family.
       0.576
SEW17264.1
GMP synthase (glutamine-hydrolyzing).
     
 0.535
Your Current Organism:
Aliicoccus persicus
NCBI taxonomy Id: 930138
Other names: A. persicus, Aliicoccus persicus Amoozegar et al. 2014, CECT 8508, DSM 28306, IBRC-M 10081, Jeotgalicoccus sp. A76(2010), strain A76
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.