STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEW02189.1Uncharacterized membrane protein YdjX, TVP38/TMEM64 family, SNARE-associated domain. (199 aa)    
Predicted Functional Partners:
SEW02203.1
Signal peptidase I.
  
  
 0.802
SEW02218.1
Signal peptidase I.
  
  
 0.743
SEV83040.1
Hypothetical protein.
  
     0.713
SEW02231.1
DNA helicase/exodeoxyribonuclease V, subunit B.
 
     0.653
SEW02081.1
Peptidyl-prolyl cis-trans isomerase B (cyclophilin B).
     
 0.632
SEW02173.1
Glucose-6-phosphate isomerase.
       0.611
SEV83508.1
Uncharacterized membrane protein YpjA.
  
     0.585
SEW02247.1
DNA helicase/exodeoxyribonuclease V, subunit A.
       0.581
SEV87710.1
Uncharacterized protein YtpQ, UPF0354 family.
  
     0.560
SEW02261.1
Uncharacterized protein.
       0.548
Your Current Organism:
Aliicoccus persicus
NCBI taxonomy Id: 930138
Other names: A. persicus, Aliicoccus persicus Amoozegar et al. 2014, CECT 8508, DSM 28306, IBRC-M 10081, Jeotgalicoccus sp. A76(2010), strain A76
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