STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEW02766.1Competence protein CoiA. (322 aa)    
Predicted Functional Partners:
SEW02785.1
Oligopeptidase F. Metallo peptidase. MEROPS family M03B.
       0.731
SEV83585.1
Hypothetical protein.
  
     0.702
SEV87132.1
Site-specific DNA-methyltransferase (adenine-specific).
  
     0.701
SEW02750.1
Adapter protein MecA 1/2.
       0.680
SEV87231.1
Septation ring formation regulator.
  
     0.659
SEV80510.1
Uncharacterized protein.
  
     0.604
SEW12560.1
Regulatory protein.
  
     0.583
SEW10874.1
Hypothetical protein.
  
     0.575
SEW02800.1
Predicted dithiol-disulfide isomerase, DsbA family.
  
     0.535
SEV85341.1
Competence protein ComEA.
   
  
 0.523
Your Current Organism:
Aliicoccus persicus
NCBI taxonomy Id: 930138
Other names: A. persicus, Aliicoccus persicus Amoozegar et al. 2014, CECT 8508, DSM 28306, IBRC-M 10081, Jeotgalicoccus sp. A76(2010), strain A76
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