STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEW05723.1Uncharacterized protein Veg. (86 aa)    
Predicted Functional Partners:
SEW05687.1
Ribonuclease M5.
       0.619
SEW05705.1
Dimethyladenosine transferase.
       0.584
SEW05673.1
TatD DNase family protein.
       0.577
SEW05660.1
methionyl-tRNA synthetase.
       0.567
SEW00855.1
Central glycolytic genes regulator.
  
     0.564
SEW05745.1
Transcriptional regulator, LytTR family.
       0.561
SEW01520.1
2',3'-cyclic-nucleotide 2'-phosphodiesterase/5'-or 3'-nucleotidase, 5'-nucleotidase family.
  
     0.532
SEW05846.1
Purine operon repressor, PurR.
 
     0.461
SEV92877.1
c-di-AMP phosphodiesterase, consists of a GGDEF-like and DHH domains.
 
    0.409
Your Current Organism:
Aliicoccus persicus
NCBI taxonomy Id: 930138
Other names: A. persicus, Aliicoccus persicus Amoozegar et al. 2014, CECT 8508, DSM 28306, IBRC-M 10081, Jeotgalicoccus sp. A76(2010), strain A76
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