STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEW06721.1SSU ribosomal protein S7P. (156 aa)    
Predicted Functional Partners:
SEV81488.1
SSU ribosomal protein S16P.
   
 0.999
SEV81731.1
SSU ribosomal protein S2P.
 
 0.999
SEV81938.1
SSU ribosomal protein S15P.
   
 0.999
SEV87257.1
SSU ribosomal protein S4P.
 
 0.999
SEV91982.1
SSU ribosomal protein S18P.
  
 0.999
SEV92389.1
SSU ribosomal protein S6P.
  
 0.999
SEV96098.1
SSU ribosomal protein S10P.
 
 0.999
SEV96115.1
LSU ribosomal protein L3P.
  
 0.999
SEV96133.1
LSU ribosomal protein L4P.
  
 0.999
SEV96170.1
LSU ribosomal protein L2P.
 
 0.999
Your Current Organism:
Aliicoccus persicus
NCBI taxonomy Id: 930138
Other names: A. persicus, Aliicoccus persicus Amoozegar et al. 2014, CECT 8508, DSM 28306, IBRC-M 10081, Jeotgalicoccus sp. A76(2010), strain A76
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.