STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEW07612.1Phosphonate transport system ATP-binding protein. (268 aa)    
Predicted Functional Partners:
SEW07597.1
Phosphonate transport system substrate-binding protein.
 
 
 0.999
SEW07627.1
Phosphonate transport system permease protein.
 
 0.999
SEW07643.1
Phosphonate transport system permease protein.
 
 0.999
SEV86428.1
ATP-binding cassette, subfamily B.
 
     
0.899
SEV95685.1
Peptide/nickel transport system ATP-binding protein/peptide/nickel transport system ATP-binding protein/microcin C transport system ATP-binding protein.
 
     
0.899
SEW02530.1
Peptide/nickel transport system ATP-binding protein.
 
     
0.899
SEV82119.1
ATP-binding cassette, subfamily B.
 
     
0.895
SEW07657.1
Hypothetical protein.
       0.610
SEW07671.1
Hypothetical protein.
     
 0.599
SEV95746.1
Peptide/nickel transport system ATP-binding protein/oligopeptide transport system ATP-binding protein.
 
     
0.548
Your Current Organism:
Aliicoccus persicus
NCBI taxonomy Id: 930138
Other names: A. persicus, Aliicoccus persicus Amoozegar et al. 2014, CECT 8508, DSM 28306, IBRC-M 10081, Jeotgalicoccus sp. A76(2010), strain A76
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.