STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEW08754.1Cardiolipin synthase. (494 aa)    
Predicted Functional Partners:
SEW01425.1
FeS assembly scaffold apoprotein IscU /Modular FeS cluster scaffolding protein NifU.
   
 
 0.795
SEW17246.1
Inosine-5'-monophosphate dehydrogenase.
    
 0.790
SEV85318.1
Competence protein ComEC.
   
 
 0.677
SEV82045.1
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase.
 
  
 0.666
SEW19222.1
Polyphosphate kinase.
  
    0.635
SEV82746.1
DNA topoisomerase IV subunit A.
     
 0.604
SEW06153.1
Dihydropteroate synthase.
      
 0.595
SEV81795.1
Phosphatidate cytidylyltransferase.
     
 0.574
SEW08770.1
Hypothetical protein.
       0.545
SEV81046.1
Guanylate kinase.
    
  0.531
Your Current Organism:
Aliicoccus persicus
NCBI taxonomy Id: 930138
Other names: A. persicus, Aliicoccus persicus Amoozegar et al. 2014, CECT 8508, DSM 28306, IBRC-M 10081, Jeotgalicoccus sp. A76(2010), strain A76
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.