STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEW10421.1Redox-sensing transcriptional repressor. (213 aa)    
Predicted Functional Partners:
SEW10439.1
Sec-independent protein translocase protein TatA.
  
  
 0.818
SEV92622.1
Ribonuclease P protein component.
   
    0.716
SEW10451.1
Sec-independent protein translocase protein TatC.
  
    0.688
SEW10466.1
Beta-fructofuranosidase.
       0.626
SEW10402.1
ATP-binding cassette, subfamily F, member 3.
       0.617
SEW10483.1
Transcriptional regulator, RpiR family.
 
  
 0.568
SEV81488.1
SSU ribosomal protein S16P.
   
    0.489
SEV85845.1
Protein translocase subunit secF /protein translocase subunit secD.
       0.449
Your Current Organism:
Aliicoccus persicus
NCBI taxonomy Id: 930138
Other names: A. persicus, Aliicoccus persicus Amoozegar et al. 2014, CECT 8508, DSM 28306, IBRC-M 10081, Jeotgalicoccus sp. A76(2010), strain A76
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.