STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEW11100.1Diguanylate cyclase (GGDEF) domain-containing protein. (351 aa)    
Predicted Functional Partners:
SEW17264.1
GMP synthase (glutamine-hydrolyzing).
    
  0.778
SEW17246.1
Inosine-5'-monophosphate dehydrogenase.
    
  0.777
SEW08999.1
Serine/threonine-protein kinase RsbW.
   
 
 0.620
SEW19277.1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
    
 0.613
SEW08980.1
Anti-sigma B factor antagonist.
  
 
  0.536
SEV88492.1
Two component transcriptional regulator, LuxR family.
 
 
 0.467
SEV87890.1
leucyl-tRNA synthetase.
   
   0.466
SEW19291.1
Two component transcriptional regulator, LuxR family.
 
 
 0.464
SEV84645.1
Competence protein ComGA/type IV pilus assembly protein PilB.
  
   
 0.436
SEW11072.1
Non-canonical (house-cleaning) NTP pyrophosphatase, all-alpha NTP-PPase family.
       0.432
Your Current Organism:
Aliicoccus persicus
NCBI taxonomy Id: 930138
Other names: A. persicus, Aliicoccus persicus Amoozegar et al. 2014, CECT 8508, DSM 28306, IBRC-M 10081, Jeotgalicoccus sp. A76(2010), strain A76
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