STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEW11691.1aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B. (476 aa)    
Predicted Functional Partners:
SEW11665.1
aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C.
 
 0.999
SEW11675.1
aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A.
 0.999
SEV83428.1
asparaginyl-tRNA synthetase.
 
 0.998
SEV85751.1
aspartyl-tRNA synthetase.
 0.996
SEW06455.1
glutamyl-tRNA synthetase /glutamate--tRNA(Gln) ligase.
 
 0.990
SEW17264.1
GMP synthase (glutamine-hydrolyzing).
  
  
 0.879
SEW05660.1
methionyl-tRNA synthetase.
  
 
 0.875
SEV82259.1
phenylalanyl-tRNA synthetase beta subunit.
  
 
 0.681
SEV81097.1
16S rRNA (cytosine967-C5)-methyltransferase.
  
   0.605
SEV80662.1
Cell division protein FtsZ.
   
  
 0.589
Your Current Organism:
Aliicoccus persicus
NCBI taxonomy Id: 930138
Other names: A. persicus, Aliicoccus persicus Amoozegar et al. 2014, CECT 8508, DSM 28306, IBRC-M 10081, Jeotgalicoccus sp. A76(2010), strain A76
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.