STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEW12656.1Hypothetical protein. (181 aa)    
Predicted Functional Partners:
SEW12641.1
A/G-specific DNA-adenine glycosylase.
       0.736
SEV86482.1
Hypothetical protein.
 
    0.723
SEW12672.1
ATP-binding cassette, subfamily B, MsbA.
       0.641
SEV80635.1
Cell division septal protein FtsQ.
  
     0.623
SEW06473.1
cysteinyl-tRNA synthetase.
 
      0.621
SEV80113.1
Uncharacterized protein YktA, UPF0223 family.
  
     0.565
SEW12625.1
Inner membrane protein.
       0.541
SEV80510.1
Uncharacterized protein.
  
     0.527
SEV85501.1
UPF0755 protein.
  
     0.488
SEV99053.1
YbbR domain-containing protein.
  
     0.478
Your Current Organism:
Aliicoccus persicus
NCBI taxonomy Id: 930138
Other names: A. persicus, Aliicoccus persicus Amoozegar et al. 2014, CECT 8508, DSM 28306, IBRC-M 10081, Jeotgalicoccus sp. A76(2010), strain A76
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.