STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEW14942.1DinB superfamily protein. (162 aa)    
Predicted Functional Partners:
SEW11989.1
ABC-2 type transport system permease protein.
  
     0.685
SEW07107.1
Protein of unknown function.
  
  
 0.605
SEW01460.1
Thiol-disulfide isomerase or thioredoxin.
  
    0.491
SEV94850.1
Osmoprotectant transport system permease protein.
 
     0.475
SEW07300.1
YwhD family protein.
  
     0.475
SEW14958.1
Manganese/zinc/iron transport system substrate-binding protein.
       0.446
SEW14971.1
Manganese/zinc/iron transport system ATP-binding protein.
       0.446
SEW14989.1
Manganese/zinc/iron transport system permease protein.
       0.446
SEW15005.1
Manganese/zinc/iron transport system permease protein.
       0.446
SEW15021.1
Iron (metal) dependent repressor, DtxR family.
       0.446
Your Current Organism:
Aliicoccus persicus
NCBI taxonomy Id: 930138
Other names: A. persicus, Aliicoccus persicus Amoozegar et al. 2014, CECT 8508, DSM 28306, IBRC-M 10081, Jeotgalicoccus sp. A76(2010), strain A76
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