STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEW15941.1Hypothetical protein. (168 aa)    
Predicted Functional Partners:
SEW15958.1
TRAP transporter, 4TM/12TM fusion protein.
 
    0.943
SEW15923.1
Hypothetical protein.
 
    0.931
SEV94123.1
Hypothetical protein.
 
    0.743
SEV94092.1
TRAP transporter, 4TM/12TM fusion protein.
 
    0.733
SEW15905.1
Hypothetical protein.
       0.491
SEW15855.1
Kynureninase.
       0.468
SEW15874.1
Kynurenine formamidase.
       0.468
SEW15887.1
Tryptophan 2,3-dioxygenase.
       0.468
SEW15975.1
UDP-sulfoquinovose synthase.
  
    0.459
SEW03699.1
Glycosyltransferase involved in cell wall bisynthesis.
  
     0.454
Your Current Organism:
Aliicoccus persicus
NCBI taxonomy Id: 930138
Other names: A. persicus, Aliicoccus persicus Amoozegar et al. 2014, CECT 8508, DSM 28306, IBRC-M 10081, Jeotgalicoccus sp. A76(2010), strain A76
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.