STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEW16954.1Hypothetical protein. (106 aa)    
Predicted Functional Partners:
SEW16937.1
DNA replication and repair protein RecR.
 
  
 0.991
SEW16970.1
DNA polymerase-3 subunit gamma/tau.
  
  
 0.853
SEV81474.1
Signal recognition particle subunit FFH/SRP54 (srp54).
 
  
  0.556
SEV85860.1
Protein translocase subunit yajC.
   
 
  0.518
SEV81451.1
Fused signal recognition particle receptor.
 
  
  0.515
SEW05536.1
DNA polymerase-3 subunit delta; Manually curated.
  
  
 0.490
SEW00474.1
Protein translocase subunit secA.
  
 
  0.486
SEV82089.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
  
    0.483
SEV96543.1
Protein translocase subunit secY/sec61 alpha.
  
 
  0.452
SEW17246.1
Inosine-5'-monophosphate dehydrogenase.
       0.448
Your Current Organism:
Aliicoccus persicus
NCBI taxonomy Id: 930138
Other names: A. persicus, Aliicoccus persicus Amoozegar et al. 2014, CECT 8508, DSM 28306, IBRC-M 10081, Jeotgalicoccus sp. A76(2010), strain A76
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.