STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEW19248.1Thioredoxin. (203 aa)    
Predicted Functional Partners:
SEW19263.1
Disulfide bond formation protein DsbB.
 
  
 0.888
SEV83754.1
Putative bacillithiol system oxidoreductase, YpdA family.
  
 0.806
SEV93435.1
Thioredoxin reductase (NADPH).
  
 0.806
SEW00694.1
Thioredoxin reductase (NADPH).
  
 0.806
SEW19235.1
23S rRNA pseudouridine1911/1915/1917 synthase.
       0.785
SEW06737.1
Translation elongation factor 2 (EF-2/EF-G).
    
 
 0.766
SEV84964.1
Cytochrome c550.
  
   
 0.746
SEW00176.1
YtkA-like.
  
     0.722
SEV83287.1
Dynamin family protein.
  
 
   0.717
SEV80405.1
Putative membrane protein.
  
     0.716
Your Current Organism:
Aliicoccus persicus
NCBI taxonomy Id: 930138
Other names: A. persicus, Aliicoccus persicus Amoozegar et al. 2014, CECT 8508, DSM 28306, IBRC-M 10081, Jeotgalicoccus sp. A76(2010), strain A76
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