STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEW19410.1Histidine triad (HIT) family protein. (140 aa)    
Predicted Functional Partners:
SEW19396.1
Gas vesicle protein.
  
    0.837
SEW19437.1
ABC-2 type transport system permease protein.
     
 0.835
SEW19422.1
ABC-2 type transport system ATP-binding protein.
 
     0.775
SEV88098.1
8-oxo-dGTPase.
  
 0.608
SEW19383.1
Foldase protein PrsA.
  
   0.590
SEV80298.1
Hypothetical protein.
   
  0.530
SEV86550.1
tRNA nucleotidyltransferase (CCA-adding enzyme).
   
   0.526
SEW06686.1
DNA-directed RNA polymerase subunit beta'.
   
  0.518
SEV81146.1
Fatty-acid peroxygenase.
     
 0.501
SEV81062.1
DNA-directed RNA polymerase subunit omega.
   
 
  0.471
Your Current Organism:
Aliicoccus persicus
NCBI taxonomy Id: 930138
Other names: A. persicus, Aliicoccus persicus Amoozegar et al. 2014, CECT 8508, DSM 28306, IBRC-M 10081, Jeotgalicoccus sp. A76(2010), strain A76
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.