STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM18943.1PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. (848 aa)    
Predicted Functional Partners:
SEM59830.1
EAL domain-containing protein.
 
0.999
SEN13552.1
EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant).
 
0.996
SEM81499.1
Two-component system, chemotaxis family, sensor kinase CheA.
 0.995
SEM76458.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
 
0.994
SEN05741.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
 
0.992
SEM52253.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
 
0.991
SEM97201.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
 
0.988
SEN70885.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
 
0.987
SEN71146.1
Diguanylate cyclase.
 
0.983
SEN90895.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
 
0.978
Your Current Organism:
Bacillus persicus
NCBI taxonomy Id: 930146
Other names: B. persicus, Bacillus persicus Didari et al. 2013, Bacillus sp. B48(2010), CECT 8001, DSM 25386, IBRC-M 10115, strain B48
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