Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEM37986.1 | SEM39123.1 | SAMN05192533_102394 | SAMN05192533_102442 | Protein-disulfide isomerase. | Thiol-disulfide isomerase or thioredoxin. | 0.494 |
SEM37986.1 | SEM54172.1 | SAMN05192533_102394 | SAMN05192533_103295 | Protein-disulfide isomerase. | Predicted dithiol-disulfide isomerase, DsbA family. | 0.569 |
SEM37986.1 | SEM72399.1 | SAMN05192533_102394 | SAMN05192533_10597 | Protein-disulfide isomerase. | Peroxiredoxin, SACOL1771 subfamily. | 0.453 |
SEM37986.1 | SEM77350.1 | SAMN05192533_102394 | SAMN05192533_105261 | Protein-disulfide isomerase. | Thioredoxin. | 0.494 |
SEM37986.1 | SEN15292.1 | SAMN05192533_102394 | SAMN05192533_109186 | Protein-disulfide isomerase. | Predicted dithiol-disulfide isomerase, DsbA family. | 0.569 |
SEM37986.1 | SEN37475.1 | SAMN05192533_102394 | SAMN05192533_11235 | Protein-disulfide isomerase. | Predicted dithiol-disulfide isomerase, DsbA family. | 0.569 |
SEM37986.1 | SEN83712.1 | SAMN05192533_102394 | SAMN05192533_12253 | Protein-disulfide isomerase. | 2-amino-4-hydroxy-6- hydroxymethyldihydropteridinediphosphokinase. | 0.535 |
SEM37986.1 | bdbC | SAMN05192533_102394 | SAMN05192533_102395 | Protein-disulfide isomerase. | Disulfide bond formation protein DsbB; Required for disulfide bond formation in some proteins. Belongs to the DsbB family. BdbC subfamily. | 0.993 |
SEM37986.1 | groL | SAMN05192533_102394 | SAMN05192533_12717 | Protein-disulfide isomerase. | Chaperonin GroEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions. | 0.490 |
SEM37986.1 | polA | SAMN05192533_102394 | SAMN05192533_102366 | Protein-disulfide isomerase. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.467 |
SEM39123.1 | SEM37986.1 | SAMN05192533_102442 | SAMN05192533_102394 | Thiol-disulfide isomerase or thioredoxin. | Protein-disulfide isomerase. | 0.494 |
SEM54172.1 | SEM37986.1 | SAMN05192533_103295 | SAMN05192533_102394 | Predicted dithiol-disulfide isomerase, DsbA family. | Protein-disulfide isomerase. | 0.569 |
SEM72399.1 | SEM37986.1 | SAMN05192533_10597 | SAMN05192533_102394 | Peroxiredoxin, SACOL1771 subfamily. | Protein-disulfide isomerase. | 0.453 |
SEM77350.1 | SEM37986.1 | SAMN05192533_105261 | SAMN05192533_102394 | Thioredoxin. | Protein-disulfide isomerase. | 0.494 |
SEN15292.1 | SEM37986.1 | SAMN05192533_109186 | SAMN05192533_102394 | Predicted dithiol-disulfide isomerase, DsbA family. | Protein-disulfide isomerase. | 0.569 |
SEN37475.1 | SEM37986.1 | SAMN05192533_11235 | SAMN05192533_102394 | Predicted dithiol-disulfide isomerase, DsbA family. | Protein-disulfide isomerase. | 0.569 |
SEN83712.1 | SEM37986.1 | SAMN05192533_12253 | SAMN05192533_102394 | 2-amino-4-hydroxy-6- hydroxymethyldihydropteridinediphosphokinase. | Protein-disulfide isomerase. | 0.535 |
bdbC | SEM37986.1 | SAMN05192533_102395 | SAMN05192533_102394 | Disulfide bond formation protein DsbB; Required for disulfide bond formation in some proteins. Belongs to the DsbB family. BdbC subfamily. | Protein-disulfide isomerase. | 0.993 |
groL | SEM37986.1 | SAMN05192533_12717 | SAMN05192533_102394 | Chaperonin GroEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions. | Protein-disulfide isomerase. | 0.490 |
groL | polA | SAMN05192533_12717 | SAMN05192533_102366 | Chaperonin GroEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.640 |
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