STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
degUTranscriptional regulatory protein degu. (216 aa)    
Predicted Functional Partners:
B5T_02206
Response regulator receiver domain protein.
  
 
 0.894
B5T_00882
Na-solute symporter/sensory box histidinekinase, putative.
 
 
 
 0.885
B5T_01637
ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein.
 
 
 
 0.784
gacS
ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein.
   
 
 0.762
B5T_00848
Putative signal transduction histidine kinase.
 
 
 0.589
ectC
Ectoine synthase; Catalyzes the circularization of gamma-N-acetyl-alpha,gamma- diaminobutyric acid (ADABA) to ectoine (1,4,5,6-tetrahydro-2-methyl-4- pyrimidine carboxylic acid), which is an excellent osmoprotectant.
     
 0.568
B5T_00693
Cyclic diguanylate phosphodiesterase (EAL) domain protein.
  
  
 0.512
B5T_00847
Putative two component sensor histidine kinase transcription regulator protein.
 
 
 0.511
B5T_03619
Signal transduction histidine kinase containing a receiver domain (Hybrid).
 
 
 
 0.473
ectB
4-aminobutyrate aminotransferase and related aminotransferase; Catalyzes reversively the conversion of L-aspartate beta- semialdehyde (ASA) to L-2,4-diaminobutyrate (DABA) by transamination with L-glutamate; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
       0.436
Your Current Organism:
Alcanivorax dieselolei
NCBI taxonomy Id: 930169
Other names: A. dieselolei B5, Alcanivorax dieselolei B5, Alcanivorax dieselolei str. B5, Alcanivorax dieselolei strain B5
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