Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MTF2PHD-type domain-containing protein. (211 aa)    
Predicted Functional Partners:
SUZ12
SUZ12 polycomb repressive complex 2 subunit.
   
 0.985
EZH2
Enhancer of zeste 2 polycomb repressive complex 2 subunit.
   
 0.977
JARID2
Jumonji and AT-rich interaction domain containing 2.
    
 0.972
EZH1
Enhancer of zeste 1 polycomb repressive complex 2 subunit.
   
 0.945
EED
Embryonic ectoderm development.
   
 0.927
SKIDA1
SKI/DACH domain containing 1.
    
 
 0.817
RBBP7
RB binding protein 7, chromatin remodeling factor.
   
 0.776
RBBP4
WD_REPEATS_REGION domain-containing protein.
   
 0.776
G3X353_SARHA
WD_REPEATS_REGION domain-containing protein.
   
 0.776
AEBP2
AE binding protein 2.
    
 0.744
Your Current Organism:
Sarcophilus harrisii
NCBI taxonomy Id: 9305
Other names: S. harrisii, Sarcophilus laniarius, Tasmanian devil
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