Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G3VDC7_SARHAEF-hand domain-containing protein. (65 aa)    
Predicted Functional Partners:
G3VA27_SARHA
TGF_BETA_2 domain-containing protein.
     
 0.571
C18orf32
Chromosome 18 open reading frame 32.
      
 0.496
PTPRG
Protein tyrosine phosphatase receptor type G.
   
 
 0.452
NKAIN4
Sodium/potassium transporting ATPase interacting 4.
   
  
 0.432
SLITRK1
SLIT and NTRK like family member 1.
   
 0.430
BMP15
TGF_BETA_2 domain-containing protein.
     
 0.409
G3WYM3_SARHA
Uncharacterized protein.
    
 
 0.401
Your Current Organism:
Sarcophilus harrisii
NCBI taxonomy Id: 9305
Other names: S. harrisii, Sarcophilus laniarius, Tasmanian devil
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