Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DNAH6Uncharacterized protein. (832 aa)    
Predicted Functional Partners:
G3VBH8_SARHA
Uncharacterized protein.
 
     0.927
DNAH1
Uncharacterized protein.
 
     0.922
DNAH14
MT domain-containing protein.
 
     0.913
DNALI1
Dynein axonemal light intermediate chain 1.
  
 0.573
G3VR58_SARHA
Uncharacterized protein.
   
 
 0.555
G3WN10_SARHA
Uncharacterized protein.
 
      0.545
DCTN2
Dynactin subunit 2.
    
 0.509
G3WZ17_SARHA
Uncharacterized protein.
   
 0.471
DNAI1
Dynein axonemal intermediate chain 1.
  
 0.468
DYNLRB2
Dynein light chain roadblock; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules.
   
 0.455
Your Current Organism:
Sarcophilus harrisii
NCBI taxonomy Id: 9305
Other names: S. harrisii, Sarcophilus laniarius, Tasmanian devil
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