Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G3VDL1_SARHAUncharacterized protein. (228 aa)    
Predicted Functional Partners:
ATP5F1E
ATP synthase F1 subunit epsilon.
      
 0.683
TEKT1
Tektin 1.
   
  
 0.666
NDUFAF2
Uncharacterized protein.
      
 0.665
NUP35
Nucleoporin NUP53; Functions as a component of the nuclear pore complex (NPC). Belongs to the Nup35 family.
      
 0.657
NUP188
Nucleoporin 188.
      
 0.657
G3WJQ4_SARHA
H15 domain-containing protein.
      
 0.648
MRPL58
Mitochondrial ribosomal protein L58.
    
   0.640
MRPL27
Mitochondrial ribosomal protein L27.
    
   0.594
MRPL50
Uncharacterized protein.
    
   0.577
NUP98
Nucleoporin 98.
      
 0.558
Your Current Organism:
Sarcophilus harrisii
NCBI taxonomy Id: 9305
Other names: S. harrisii, Sarcophilus laniarius, Tasmanian devil
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