G3VDM6_SARHA protein (Sarcophilus harrisii) - STRING interaction network

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G3VDM6_SARHA

DUF3546 domain-containing protein. (219 aa)

Predicted Functional Partners:

SRRT

0.940

NCBP1

0.924

NCBP2

0.893

LOC100921959

0.893

MTREX

0.869

PHAX

0.835

G3VM41_SARHA

0.815

LOC100928546

0.815

G3VBX7_SARHA

0.803

ALYREF

0.803

Your Current Organism:

Sarcophilus harrisii

NCBI taxonomy Id: 9305
Other names: S. harrisii, Sarcophilus laniarius, Tasmanian devil

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ALYREF	G3VDM6_SARHA	ENSSHAP00000012204	ENSSHAP00000001280	Aly/REF export factor.	DUF3546 domain-containing protein.	0.803
ALYREF	LOC100921959	ENSSHAP00000012204	ENSSHAP00000014376	Aly/REF export factor.	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	0.704
ALYREF	MTREX	ENSSHAP00000012204	ENSSHAP00000005258	Aly/REF export factor.	Mtr4 exosome RNA helicase.	0.746
ALYREF	NCBP1	ENSSHAP00000012204	ENSSHAP00000018709	Aly/REF export factor.	Nuclear cap binding protein subunit 1.	0.906
ALYREF	NCBP2	ENSSHAP00000012204	ENSSHAP00000004982	Aly/REF export factor.	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	0.704
ALYREF	SRRT	ENSSHAP00000012204	ENSSHAP00000008485	Aly/REF export factor.	ARS2 domain-containing protein.	0.803
G3VBX7_SARHA	G3VDM6_SARHA	ENSSHAP00000000681	ENSSHAP00000001280	RRM domain-containing protein.	DUF3546 domain-containing protein.	0.803
G3VBX7_SARHA	LOC100921959	ENSSHAP00000000681	ENSSHAP00000014376	RRM domain-containing protein.	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	0.704
G3VBX7_SARHA	MTREX	ENSSHAP00000000681	ENSSHAP00000005258	RRM domain-containing protein.	Mtr4 exosome RNA helicase.	0.746
G3VBX7_SARHA	NCBP1	ENSSHAP00000000681	ENSSHAP00000018709	RRM domain-containing protein.	Nuclear cap binding protein subunit 1.	0.906
G3VBX7_SARHA	NCBP2	ENSSHAP00000000681	ENSSHAP00000004982	RRM domain-containing protein.	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	0.704
G3VBX7_SARHA	SRRT	ENSSHAP00000000681	ENSSHAP00000008485	RRM domain-containing protein.	ARS2 domain-containing protein.	0.803
G3VDM6_SARHA	ALYREF	ENSSHAP00000001280	ENSSHAP00000012204	DUF3546 domain-containing protein.	Aly/REF export factor.	0.803
G3VDM6_SARHA	G3VBX7_SARHA	ENSSHAP00000001280	ENSSHAP00000000681	DUF3546 domain-containing protein.	RRM domain-containing protein.	0.803
G3VDM6_SARHA	G3VM41_SARHA	ENSSHAP00000001280	ENSSHAP00000004246	DUF3546 domain-containing protein.	Uncharacterized protein.	0.815
G3VDM6_SARHA	LOC100921959	ENSSHAP00000001280	ENSSHAP00000014376	DUF3546 domain-containing protein.	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	0.893
G3VDM6_SARHA	LOC100928546	ENSSHAP00000001280	ENSSHAP00000011989	DUF3546 domain-containing protein.	Uncharacterized protein.	0.815
G3VDM6_SARHA	MTREX	ENSSHAP00000001280	ENSSHAP00000005258	DUF3546 domain-containing protein.	Mtr4 exosome RNA helicase.	0.869
G3VDM6_SARHA	NCBP1	ENSSHAP00000001280	ENSSHAP00000018709	DUF3546 domain-containing protein.	Nuclear cap binding protein subunit 1.	0.924
G3VDM6_SARHA	NCBP2	ENSSHAP00000001280	ENSSHAP00000004982	DUF3546 domain-containing protein.	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	0.893