Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G3VDN1_SARHAUncharacterized protein. (252 aa)    
Predicted Functional Partners:
G3VNL8_SARHA
Uncharacterized protein.
  
 
  0.466
G3WYP5_SARHA
Uncharacterized protein.
  
 
  0.455
PES1
Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome; Belongs to the pescadillo family.
   
 0.432
WDR18
WD repeat domain 18.
   
 0.428
TEX10
Testis expressed 10.
   
 0.425
G3VED6_SARHA
Uncharacterized protein.
  
 
  0.407
G3VMR6_SARHA
Uncharacterized protein.
  
 
  0.404
G3VR21_SARHA
Uncharacterized protein.
  
 
   0.404
Your Current Organism:
Sarcophilus harrisii
NCBI taxonomy Id: 9305
Other names: S. harrisii, Sarcophilus laniarius, Tasmanian devil
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