Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PTGDRProstaglandin D2 receptor. (359 aa)    
Predicted Functional Partners:
ANKRD13C
Ankyrin repeat domain 13C.
    
 
 0.720
PTGDR2
Prostaglandin D2 receptor 2; Belongs to the G-protein coupled receptor 1 family.
    
 0.610
PDS5B
PDS5 cohesin associated factor B.
      
 0.535
AGTRAP
Angiotensin II receptor associated protein.
    
 
 0.516
TBC1D21
TBC1 domain family member 21.
      
 0.474
PCYOX1
Prenylcys_lyase domain-containing protein.
      
 0.454
ARL14
ADP ribosylation factor like GTPase 14; Belongs to the small GTPase superfamily. Arf family.
    
 0.433
SAYSD1
SAYSvFN domain-containing protein.
      
 0.419
FBXL12
F-box domain-containing protein.
      
 0.418
CAAP1
Caspase activity and apoptosis inhibitor 1.
      
 0.408
Your Current Organism:
Sarcophilus harrisii
NCBI taxonomy Id: 9305
Other names: S. harrisii, Sarcophilus laniarius, Tasmanian devil
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