STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKAP7A-kinase anchoring protein 7. (254 aa)    
Predicted Functional Partners:
PRPF3
Pre-mRNA processing factor 3.
    
   0.811
AKAP6
A-kinase anchoring protein 6.
      
 0.750
AKAP1
A-kinase anchoring protein 1.
      
 0.712
EMP1
Epithelial membrane protein 1.
      
 0.705
G3VA27_SARHA
TGF_BETA_2 domain-containing protein.
   
  
 0.696
ASCC2
Activating signal cointegrator 1 complex subunit 2.
    
 0.666
HSPB6
Heat shock protein family B (small) member 6.
      
 0.649
GAPDHS
Gp_dh_N domain-containing protein; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
      
 0.648
TRIP4
Thyroid hormone receptor interactor 4.
   
 
 0.592
KCNQ5
Potassium voltage-gated channel subfamily Q member 5.
      
 0.570
Your Current Organism:
Sarcophilus harrisii
NCBI taxonomy Id: 9305
Other names: S. harrisii, Sarcophilus laniarius, Tasmanian devil
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.