ITGB7 protein (Sarcophilus harrisii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

ITGB7

Integrin beta; Belongs to the integrin beta chain family. (808 aa)

Predicted Functional Partners:

ITGA4

0.997

G3VNX1_SARHA

0.992

FLNA

0.987

ITGAV

0.981

ITGA5

0.978

G3WBW0_SARHA

0.974

FLNB

0.961

ITGA3

0.961

ITGA7

0.940

ITGA10

0.937

Your Current Organism:

Sarcophilus harrisii

NCBI taxonomy Id: 9305
Other names: S. harrisii, Sarcophilus laniarius, Tasmanian devil

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
FLNA	FLNB	ENSSHAP00000001182	ENSSHAP00000004784	Filamin A.	Filamin B.	0.997
FLNA	G3WBW0_SARHA	ENSSHAP00000001182	ENSSHAP00000012915	Filamin A.	VWFA domain-containing protein; Belongs to the integrin alpha chain family.	0.903
FLNA	ITGA10	ENSSHAP00000001182	ENSSHAP00000021980	Filamin A.	Integrin subunit alpha 10; Belongs to the integrin alpha chain family.	0.900
FLNA	ITGA3	ENSSHAP00000001182	ENSSHAP00000014874	Filamin A.	Integrin subunit alpha 3; Belongs to the integrin alpha chain family.	0.921
FLNA	ITGA4	ENSSHAP00000001182	ENSSHAP00000016488	Filamin A.	Integrin subunit alpha 4; Belongs to the integrin alpha chain family.	0.915
FLNA	ITGA5	ENSSHAP00000001182	ENSSHAP00000012979	Filamin A.	Integrin subunit alpha 5; Belongs to the integrin alpha chain family.	0.928
FLNA	ITGA7	ENSSHAP00000001182	ENSSHAP00000011190	Filamin A.	Integrin subunit alpha 7; Belongs to the integrin alpha chain family.	0.914
FLNA	ITGAV	ENSSHAP00000001182	ENSSHAP00000010452	Filamin A.	Integrin subunit alpha V; Belongs to the integrin alpha chain family.	0.922
FLNA	ITGB7	ENSSHAP00000001182	ENSSHAP00000001367	Filamin A.	Integrin beta; Belongs to the integrin beta chain family.	0.987
FLNB	FLNA	ENSSHAP00000004784	ENSSHAP00000001182	Filamin B.	Filamin A.	0.997
FLNB	G3WBW0_SARHA	ENSSHAP00000004784	ENSSHAP00000012915	Filamin B.	VWFA domain-containing protein; Belongs to the integrin alpha chain family.	0.903
FLNB	ITGA10	ENSSHAP00000004784	ENSSHAP00000021980	Filamin B.	Integrin subunit alpha 10; Belongs to the integrin alpha chain family.	0.900
FLNB	ITGA3	ENSSHAP00000004784	ENSSHAP00000014874	Filamin B.	Integrin subunit alpha 3; Belongs to the integrin alpha chain family.	0.916
FLNB	ITGA4	ENSSHAP00000004784	ENSSHAP00000016488	Filamin B.	Integrin subunit alpha 4; Belongs to the integrin alpha chain family.	0.915
FLNB	ITGA5	ENSSHAP00000004784	ENSSHAP00000012979	Filamin B.	Integrin subunit alpha 5; Belongs to the integrin alpha chain family.	0.924
FLNB	ITGA7	ENSSHAP00000004784	ENSSHAP00000011190	Filamin B.	Integrin subunit alpha 7; Belongs to the integrin alpha chain family.	0.914
FLNB	ITGAV	ENSSHAP00000004784	ENSSHAP00000010452	Filamin B.	Integrin subunit alpha V; Belongs to the integrin alpha chain family.	0.924
FLNB	ITGB7	ENSSHAP00000004784	ENSSHAP00000001367	Filamin B.	Integrin beta; Belongs to the integrin beta chain family.	0.961
G3VNX1_SARHA	ITGA4	ENSSHAP00000004876	ENSSHAP00000016488	VWFA domain-containing protein.	Integrin subunit alpha 4; Belongs to the integrin alpha chain family.	0.404
G3VNX1_SARHA	ITGB7	ENSSHAP00000004876	ENSSHAP00000001367	VWFA domain-containing protein.	Integrin beta; Belongs to the integrin beta chain family.	0.992