Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G3VE29_SARHA3'-5' exonuclease domain-containing protein. (736 aa)    
Predicted Functional Partners:
ZFYVE28
Zinc finger FYVE-type containing 28.
      
 0.746
RBM46
RNA binding motif protein 46.
      
 0.746
DBF4B
Uncharacterized protein.
    
 
 0.652
AMIGO1
Adhesion molecule with Ig like domain 1.
    
 0.607
EXD1
Exonuclease 3'-5' domain containing 1.
      
 0.589
PARPBP
PARP1 binding protein.
    
 
 0.586
AFF2
AF4/FMR2 family member 2.
   
 0.583
G3VNW3_SARHA
Uncharacterized protein.
   
 0.580
CCDC18
Coiled-coil domain containing 18.
    
 
 0.500
RNF121
Ring finger protein 121.
      
 0.499
Your Current Organism:
Sarcophilus harrisii
NCBI taxonomy Id: 9305
Other names: S. harrisii, Sarcophilus laniarius, Tasmanian devil
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