Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G3VEB9_SARHAMRG domain-containing protein. (312 aa)    
Predicted Functional Partners:
MEAF6
MYST/Esa1 associated factor 6.
   
 0.530
G3WAM6_SARHA
Uncharacterized protein.
   
 0.509
DMAP1
DNA methyltransferase 1 associated protein 1.
    
 0.499
BRMS1L
BRMS1 like transcriptional repressor.
   
 0.474
VPS72
Vacuolar protein sorting 72 homolog.
    
 0.474
SUDS3
SDS3 homolog, SIN3A corepressor complex component.
   
 0.474
RBBP7
RB binding protein 7, chromatin remodeling factor.
   
 0.469
RBBP4
WD_REPEATS_REGION domain-containing protein.
   
 0.469
WDR73
WD repeat domain 73.
   
 0.469
G3X353_SARHA
WD_REPEATS_REGION domain-containing protein.
   
 0.469
Your Current Organism:
Sarcophilus harrisii
NCBI taxonomy Id: 9305
Other names: S. harrisii, Sarcophilus laniarius, Tasmanian devil
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