Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PNRC2Proline rich nuclear receptor coactivator 2. (141 aa)    
Predicted Functional Partners:
DCP1A
Decapping mRNA 1A.
    
 0.973
DCP2
Decapping mRNA 2.
    
 
 0.871
SMG8
Uncharacterized protein.
     
 0.820
FUCA1
Alpha-L-fucosidase; Alpha-L-fucosidase is responsible for hydrolyzing the alpha- 1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins.
      
 0.748
UPF1
UPF1 RNA helicase and ATPase.
    
 0.748
SMG9
SMG9 nonsense mediated mRNA decay factor.
     
 0.723
DCP1B
Decapping mRNA 1B.
    
 0.718
IL15
Interleukin; Belongs to the IL-15/IL-21 family.
      
 0.640
EDC3
Enhancer of mRNA decapping 3.
    
 
 0.620
UPF2
MIF4G domain-containing protein.
     
 0.610
Your Current Organism:
Sarcophilus harrisii
NCBI taxonomy Id: 9305
Other names: S. harrisii, Sarcophilus laniarius, Tasmanian devil
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