STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3VEJ2_SARHAUncharacterized protein. (940 aa)    
Predicted Functional Partners:
G3VC85_SARHA
Uncharacterized protein.
 
     0.812
IFT57
Intraflagellar transport 57.
    
 0.502
IFT172
Intraflagellar transport 172.
    
 0.491
TRAF3IP1
TRAF3 interacting protein 1.
    
 0.484
CASK
Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family.
   
 0.460
IFT81
Intraflagellar transport 81.
    
 0.452
IFT52
Intraflagellar transport 52.
    
 0.446
CLUAP1
Clusterin associated protein 1.
    
 0.435
TTC26
Tetratricopeptide repeat domain 26.
   
 0.420
TTC30B
Uncharacterized protein.
    
 0.418
Your Current Organism:
Sarcophilus harrisii
NCBI taxonomy Id: 9305
Other names: S. harrisii, Sarcophilus laniarius, Tasmanian devil
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