Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC100921739Uncharacterized protein. (303 aa)    
Predicted Functional Partners:
RNF114
Ring finger protein 114.
    
   0.573
KLHL28
Kelch like family member 28.
    
 
 0.486
ZC3HC1
Zinc finger C3HC-type containing 1.
    
 
 0.484
G3VU45_SARHA
Uncharacterized protein.
    
  0.436
ZNF653
Uncharacterized protein.
   
 0.421
ZBTB39
Zinc finger and BTB domain containing 39.
   
 0.410
Your Current Organism:
Sarcophilus harrisii
NCBI taxonomy Id: 9305
Other names: S. harrisii, Sarcophilus laniarius, Tasmanian devil
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