Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PIMREGUncharacterized protein. (292 aa)    
Predicted Functional Partners:
TDRD7
Uncharacterized protein.
    
 
 0.830
KIF20A
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
  
 0.677
CENPA
Centromere protein A.
   
  
 0.661
GAS2L3
Growth arrest specific 2 like 3.
   
  
 0.658
CKAP2
CKAP2_C domain-containing protein.
   
  
 0.630
LOC105749340
Uncharacterized protein.
   
  
 0.609
G3WTX8_SARHA
Uncharacterized protein.
   
  
 0.609
CENPE
Centromere protein E; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
  
 0.573
BPIFB2
Uncharacterized protein.
      
 0.571
DLGAP5
Uncharacterized protein.
   
  
 0.568
Your Current Organism:
Sarcophilus harrisii
NCBI taxonomy Id: 9305
Other names: S. harrisii, Sarcophilus laniarius, Tasmanian devil
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