Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G3VFB8_SARHAC2 domain-containing protein. (81 aa)    
Predicted Functional Partners:
DYSF
Dysferlin.
 
      0.845
ANXA2
Annexin.
   
 0.550
ANXA6
Annexin.
   
 0.538
TRIM72
Tripartite motif containing 72.
     
 0.536
ANXA1
Annexin.
   
 0.520
TRIM50
Tripartite motif containing 50.
     
 0.424
ANXA5
Annexin.
   
 0.423
G3VDQ1_SARHA
C2 domain-containing protein.
 
 
  
 0.404
CAV1
Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family.
   
 0.400
Your Current Organism:
Sarcophilus harrisii
NCBI taxonomy Id: 9305
Other names: S. harrisii, Sarcophilus laniarius, Tasmanian devil
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