Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G3VFE2_SARHAUncharacterized protein. (337 aa)    
Predicted Functional Partners:
FAM32A
Family with sequence similarity 32 member A.
    
 0.748
SDE2
SDE2 telomere maintenance homolog.
    
 0.736
G3W0R4_SARHA
Slu7 domain-containing protein.
   
 0.696
SLU7
Slu7 domain-containing protein.
   
 0.696
CDC40
Cell division cycle 40.
   
  0.676
SYF2
Uncharacterized protein.
   
 0.665
LOC100919277
Uncharacterized protein.
   
 0.665
PPIL1
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
    
  0.658
PRKRIP1
PRKR interacting protein 1.
   
 
 0.657
CCDC12
Uncharacterized protein.
    
 0.656
Your Current Organism:
Sarcophilus harrisii
NCBI taxonomy Id: 9305
Other names: S. harrisii, Sarcophilus laniarius, Tasmanian devil
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