KIF1C protein (Sarcophilus harrisii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

KIF1C

Kinesin family member 1C; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (1101 aa)

Predicted Functional Partners:

KIF1A

0.893

LOC100922507

0.702

HOOK3

0.664

G3W805_SARHA

0.559

SALL4

0.539

CIT

0.537

USH1C

0.533

SNAP25

0.516

PTPN21

0.510

DICER1

0.503

Your Current Organism:

Sarcophilus harrisii

NCBI taxonomy Id: 9305
Other names: S. harrisii, Sarcophilus laniarius, Tasmanian devil

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CIT	G3W805_SARHA	ENSSHAP00000021400	ENSSHAP00000011560	Citron Rho-interacting kinase; Plays a role in cytokinesis. Displays serine/threonine protein kinase activity; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family.	Uncharacterized protein.	0.540
CIT	KIF1A	ENSSHAP00000021400	ENSSHAP00000008201	Citron Rho-interacting kinase; Plays a role in cytokinesis. Displays serine/threonine protein kinase activity; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family.	Kinesin family member 1A; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.537
CIT	KIF1C	ENSSHAP00000021400	ENSSHAP00000001994	Citron Rho-interacting kinase; Plays a role in cytokinesis. Displays serine/threonine protein kinase activity; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family.	Kinesin family member 1C; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.537
CIT	LOC100922507	ENSSHAP00000021400	ENSSHAP00000012392	Citron Rho-interacting kinase; Plays a role in cytokinesis. Displays serine/threonine protein kinase activity; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family.	Uncharacterized protein.	0.588
DICER1	KIF1A	ENSSHAP00000014131	ENSSHAP00000008201	Dicer 1, ribonuclease III; Belongs to the helicase family. Dicer subfamily.	Kinesin family member 1A; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.416
DICER1	KIF1C	ENSSHAP00000014131	ENSSHAP00000001994	Dicer 1, ribonuclease III; Belongs to the helicase family. Dicer subfamily.	Kinesin family member 1C; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.503
G3W805_SARHA	CIT	ENSSHAP00000011560	ENSSHAP00000021400	Uncharacterized protein.	Citron Rho-interacting kinase; Plays a role in cytokinesis. Displays serine/threonine protein kinase activity; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family.	0.540
G3W805_SARHA	KIF1A	ENSSHAP00000011560	ENSSHAP00000008201	Uncharacterized protein.	Kinesin family member 1A; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.559
G3W805_SARHA	KIF1C	ENSSHAP00000011560	ENSSHAP00000001994	Uncharacterized protein.	Kinesin family member 1C; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.559
HOOK3	KIF1A	ENSSHAP00000021857	ENSSHAP00000008201	Hook microtubule tethering protein 3.	Kinesin family member 1A; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.553
HOOK3	KIF1C	ENSSHAP00000021857	ENSSHAP00000001994	Hook microtubule tethering protein 3.	Kinesin family member 1C; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.664
HOOK3	PTPN21	ENSSHAP00000021857	ENSSHAP00000018097	Hook microtubule tethering protein 3.	Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class subfamily.	0.556
KIF1A	CIT	ENSSHAP00000008201	ENSSHAP00000021400	Kinesin family member 1A; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Citron Rho-interacting kinase; Plays a role in cytokinesis. Displays serine/threonine protein kinase activity; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family.	0.537
KIF1A	DICER1	ENSSHAP00000008201	ENSSHAP00000014131	Kinesin family member 1A; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Dicer 1, ribonuclease III; Belongs to the helicase family. Dicer subfamily.	0.416
KIF1A	G3W805_SARHA	ENSSHAP00000008201	ENSSHAP00000011560	Kinesin family member 1A; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Uncharacterized protein.	0.559
KIF1A	HOOK3	ENSSHAP00000008201	ENSSHAP00000021857	Kinesin family member 1A; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Hook microtubule tethering protein 3.	0.553
KIF1A	KIF1C	ENSSHAP00000008201	ENSSHAP00000001994	Kinesin family member 1A; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Kinesin family member 1C; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.893
KIF1A	LOC100922507	ENSSHAP00000008201	ENSSHAP00000012392	Kinesin family member 1A; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Uncharacterized protein.	0.702
KIF1A	PTPN21	ENSSHAP00000008201	ENSSHAP00000018097	Kinesin family member 1A; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class subfamily.	0.608
KIF1A	SALL4	ENSSHAP00000008201	ENSSHAP00000021253	Kinesin family member 1A; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Spalt like transcription factor 4.	0.447