Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MTA1Metastasis associated 1. (650 aa)    
Predicted Functional Partners:
MTA2
Metastasis associated 1 family member 2.
  
0.999
MTA3
Metastasis associated 1 family member 3.
  
0.998
GATAD2B
GATA zinc finger domain containing 2B.
   
 0.986
GATAD2A
GATA zinc finger domain containing 2A.
   
 0.985
CHD3
Chromodomain helicase DNA binding protein 3.
   
 0.985
CDK2AP1
Cyclin dependent kinase 2 associated protein 1.
    
 0.954
G3WQQ3_SARHA
Uncharacterized protein.
   
 0.953
CHD5
Chromodomain helicase DNA binding protein 5.
   
 0.938
BCL11A
BAF chromatin remodeling complex subunit BCL11A.
    
 0.937
ZNF423
Zinc finger protein 423.
    
  0.937
Your Current Organism:
Sarcophilus harrisii
NCBI taxonomy Id: 9305
Other names: S. harrisii, Sarcophilus laniarius, Tasmanian devil
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