STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MTA1Metastasis associated 1. (650 aa)    
Predicted Functional Partners:
GATAD2A
GATA zinc finger domain containing 2A.
   
 0.915
CHD3
Chromodomain helicase DNA binding protein 3.
   
 0.911
GATAD2B
GATA zinc finger domain containing 2B.
   
 0.908
MTA2
Metastasis associated 1 family member 2.
  
 
0.890
MTA3
Metastasis associated 1 family member 3.
  
 
0.809
RBBP7
RB binding protein 7, chromatin remodeling factor.
   
 0.799
RBBP4
WD_REPEATS_REGION domain-containing protein.
   
 0.799
G3X353_SARHA
WD_REPEATS_REGION domain-containing protein.
   
 0.799
G3VNC3_SARHA
Uncharacterized protein.
   
 0.763
G3WQQ3_SARHA
Uncharacterized protein.
   
 0.763
Your Current Organism:
Sarcophilus harrisii
NCBI taxonomy Id: 9305
Other names: S. harrisii, Sarcophilus laniarius, Tasmanian devil
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.