STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3VI93_SARHAMyosin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1526 aa)    
Predicted Functional Partners:
PNPT1
Polyribonucleotide nucleotidyltransferase 1.
      
 0.653
CIB2
Calcium and integrin binding family member 2.
    
 0.616
WHRN
Whirlin.
    
 0.543
USH1C
USH1 protein network component harmonin.
   
 0.530
MYL6
Myosin light chain 6.
    
 0.520
ANKS4B
Ankyrin repeat and sterile alpha motif domain containing 4B.
   
 0.509
USH1G
USH1 protein network component sans.
   
 0.509
CIB3
Calcium and integrin binding family member 3.
    
 0.451
TPRN
Phostensin domain-containing protein.
     
 0.432
CDC42
Cell division cycle 42.
    
 0.403
Your Current Organism:
Sarcophilus harrisii
NCBI taxonomy Id: 9305
Other names: S. harrisii, Sarcophilus laniarius, Tasmanian devil
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