Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G3VIJ6_SARHAUncharacterized protein; Belongs to the tropomyosin family. (232 aa)    
Predicted Functional Partners:
G3VAX3_SARHA
Uncharacterized protein.
   
 0.820
TNNT2
Troponin T2, cardiac type.
   
 0.783
TNNT1
Troponin T1, slow skeletal type.
   
 0.783
TNNI1
Troponin I1, slow skeletal type.
   
 0.759
MYL1
Myosin light chain 1.
   
 0.740
TNNI2
Uncharacterized protein.
   
 0.723
GATD1
Glutamine amidotransferase like class 1 domain containing 1.
   
 0.634
TMOD1
Tropomodulin 1.
   
 0.633
TPR
Translocated promoter region, nuclear basket protein.
   
 
 0.615
NTRK1
Tyrosine-protein kinase receptor.
    
 0.606
Your Current Organism:
Sarcophilus harrisii
NCBI taxonomy Id: 9305
Other names: S. harrisii, Sarcophilus laniarius, Tasmanian devil
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