Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CH25H | ERG28 | ENSSHAP00000003250 | ENSSHAP00000019855 | Cholesterol 25-hydroxylase; Belongs to the sterol desaturase family. | Ergosterol biosynthesis 28 homolog. | 0.819 |
CH25H | FDFT1 | ENSSHAP00000003250 | ENSSHAP00000010942 | Cholesterol 25-hydroxylase; Belongs to the sterol desaturase family. | Farnesyl-diphosphate farnesyltransferase 1. | 0.846 |
CH25H | G3VXN6_SARHA | ENSSHAP00000003250 | ENSSHAP00000007941 | Cholesterol 25-hydroxylase; Belongs to the sterol desaturase family. | Uncharacterized protein. | 0.523 |
CH25H | LSS | ENSSHAP00000003250 | ENSSHAP00000005171 | Cholesterol 25-hydroxylase; Belongs to the sterol desaturase family. | Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family. | 0.843 |
CH25H | NDUFAF6 | ENSSHAP00000003250 | ENSSHAP00000003778 | Cholesterol 25-hydroxylase; Belongs to the sterol desaturase family. | NADH:ubiquinone oxidoreductase complex assembly factor 6. | 0.523 |
CH25H | R3HDM4 | ENSSHAP00000003250 | ENSSHAP00000003455 | Cholesterol 25-hydroxylase; Belongs to the sterol desaturase family. | R3H domain-containing protein. | 0.597 |
CH25H | SC5D | ENSSHAP00000003250 | ENSSHAP00000019095 | Cholesterol 25-hydroxylase; Belongs to the sterol desaturase family. | Sterol-C5-desaturase; Belongs to the sterol desaturase family. | 0.933 |
CH25H | TM7SF2 | ENSSHAP00000003250 | ENSSHAP00000001116 | Cholesterol 25-hydroxylase; Belongs to the sterol desaturase family. | Transmembrane 7 superfamily member 2. | 0.650 |
ERG28 | CH25H | ENSSHAP00000019855 | ENSSHAP00000003250 | Ergosterol biosynthesis 28 homolog. | Cholesterol 25-hydroxylase; Belongs to the sterol desaturase family. | 0.819 |
ERG28 | FAXDC2 | ENSSHAP00000019855 | ENSSHAP00000013209 | Ergosterol biosynthesis 28 homolog. | Fatty acid hydroxylase domain containing 2; Belongs to the sterol desaturase family. | 0.819 |
ERG28 | FDFT1 | ENSSHAP00000019855 | ENSSHAP00000010942 | Ergosterol biosynthesis 28 homolog. | Farnesyl-diphosphate farnesyltransferase 1. | 0.954 |
ERG28 | G3VXN6_SARHA | ENSSHAP00000019855 | ENSSHAP00000007941 | Ergosterol biosynthesis 28 homolog. | Uncharacterized protein. | 0.758 |
ERG28 | LSS | ENSSHAP00000019855 | ENSSHAP00000005171 | Ergosterol biosynthesis 28 homolog. | Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family. | 0.967 |
ERG28 | MSMO1 | ENSSHAP00000019855 | ENSSHAP00000000162 | Ergosterol biosynthesis 28 homolog. | Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family. | 0.819 |
ERG28 | NDUFAF6 | ENSSHAP00000019855 | ENSSHAP00000003778 | Ergosterol biosynthesis 28 homolog. | NADH:ubiquinone oxidoreductase complex assembly factor 6. | 0.758 |
ERG28 | R3HDM4 | ENSSHAP00000019855 | ENSSHAP00000003455 | Ergosterol biosynthesis 28 homolog. | R3H domain-containing protein. | 0.807 |
ERG28 | SC5D | ENSSHAP00000019855 | ENSSHAP00000019095 | Ergosterol biosynthesis 28 homolog. | Sterol-C5-desaturase; Belongs to the sterol desaturase family. | 0.968 |
ERG28 | TM7SF2 | ENSSHAP00000019855 | ENSSHAP00000001116 | Ergosterol biosynthesis 28 homolog. | Transmembrane 7 superfamily member 2. | 0.808 |
FAXDC2 | ERG28 | ENSSHAP00000013209 | ENSSHAP00000019855 | Fatty acid hydroxylase domain containing 2; Belongs to the sterol desaturase family. | Ergosterol biosynthesis 28 homolog. | 0.819 |
FAXDC2 | FDFT1 | ENSSHAP00000013209 | ENSSHAP00000010942 | Fatty acid hydroxylase domain containing 2; Belongs to the sterol desaturase family. | Farnesyl-diphosphate farnesyltransferase 1. | 0.838 |
page 1 of 5