STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IL16Pro-interleukin-16; Interleukin-16 stimulates a migratory response in CD4+ lymphocytes, monocytes, and eosinophils. Primes CD4+ T-cells for IL-2 and IL-15 responsiveness. Also induces T-lymphocyte expression of interleukin 2 receptor. Ligand for CD4. (1473 aa)    
Predicted Functional Partners:
CD4
Uncharacterized protein.
    
  0.903
IL1A
Interleukin-1; Belongs to the IL-1 family.
   
  
 0.576
IFT57
Intraflagellar transport 57.
    
 0.504
IFT80
Intraflagellar transport 80.
   
 0.502
IFT172
Intraflagellar transport 172.
    
 0.495
TRAF3IP1
TRAF3 interacting protein 1.
    
 0.494
G3VFR5_SARHA
Uncharacterized protein.
   
 0.479
CASK
Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family.
    
 0.464
CASP3
Uncharacterized protein; Belongs to the peptidase C14A family.
     
 0.458
G3W651_SARHA
Uncharacterized protein; Belongs to the peptidase C14A family.
     
 0.458
Your Current Organism:
Sarcophilus harrisii
NCBI taxonomy Id: 9305
Other names: S. harrisii, Sarcophilus laniarius, Tasmanian devil
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