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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPL7ARibosomal protein L7a. (266 aa)    
Predicted Functional Partners:
RPL27A
Ribosomal_L18e/L15P domain-containing protein; Belongs to the universal ribosomal protein uL15 family.
  
 0.999
RPL21
Uncharacterized protein.
   
 0.999
RPL14
Ribosomal protein L14.
   
 0.999
RPL4
Ribosomal protein L4.
  
 0.999
G3VJX7_SARHA
Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family.
  
 0.999
RPL10
Ribosomal protein L10.
  
 0.999
RPL35A
Uncharacterized protein.
   
 0.999
RPL35
Ribosomal protein L35.
  
 0.999
RPL9
Ribosomal protein L9.
  
 0.999
RPS11
Ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family.
  
 0.999
Your Current Organism:
Sarcophilus harrisii
NCBI taxonomy Id: 9305
Other names: S. harrisii, Sarcophilus laniarius, Tasmanian devil
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