STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TULP4Tub domain-containing protein; Belongs to the TUB family. (1002 aa)    
Predicted Functional Partners:
G3VPC9_SARHA
Uncharacterized protein.
 
      0.888
CUL5
Cullin 5; Belongs to the cullin family.
    
 0.582
RIMS2
Regulating synaptic membrane exocytosis 2.
      
 0.577
EPRS1
Glutamyl-prolyl-tRNA synthetase.
      
 0.565
ELOB
Elongin B.
    
  0.480
KCNE4
Potassium voltage-gated channel subfamily E regulatory subunit 4.
      
 0.452
CAND1
Cullin associated and neddylation dissociated 1.
   
 
 0.450
SERAC1
Uncharacterized protein.
      
 0.450
CAND2
Cullin associated and neddylation dissociated 2 (putative).
   
 
 0.445
TMEM242
Transmembrane protein 242.
      
 0.443
Your Current Organism:
Sarcophilus harrisii
NCBI taxonomy Id: 9305
Other names: S. harrisii, Sarcophilus laniarius, Tasmanian devil
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.