STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KLHL40Kelch like family member 40. (632 aa)    
Predicted Functional Partners:
BBS9
Bardet-Biedl syndrome 9.
   
 0.918
G3W4X1_SARHA
BBS1 domain-containing protein.
    
 0.914
BBS4
Bardet-Biedl syndrome 4.
    
 0.898
TTC8
Tetratricopeptide repeat domain 8.
   
 0.888
BBS7
Bardet-Biedl syndrome 7.
   
 0.881
BBS2
Bardet-Biedl syndrome 2 protein homolog.
    
 0.876
LZTFL1
Leucine zipper transcription factor like 1.
   
 0.698
NEB
Nebulin.
   
 
 0.604
CUL3
Cullin 3; Belongs to the cullin family.
    
 0.590
KLHL21
Uncharacterized protein.
  
 
  0.576
Your Current Organism:
Sarcophilus harrisii
NCBI taxonomy Id: 9305
Other names: S. harrisii, Sarcophilus laniarius, Tasmanian devil
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.