STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC4A5Anion exchange protein. (1103 aa)    
Predicted Functional Partners:
NPHS2
NPHS2 stomatin family member, podocin.
    
 0.548
GC
GC vitamin D binding protein.
      
 0.535
DNALI1
Dynein axonemal light intermediate chain 1.
   
  
 0.513
UTP11
U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.
      
 0.510
CHDH
GMC_OxRdtase_N domain-containing protein.
      
 0.485
ARHGAP1
Rho GTPase activating protein 1.
     
 0.477
SLC16A4
Solute carrier family 16 member 4.
      
 0.456
KANK1
KN motif and ankyrin repeat domains 1.
    
 0.444
KANK3
ANK_REP_REGION domain-containing protein.
    
 0.444
VDAC2
Voltage dependent anion channel 2.
      
 0.433
Your Current Organism:
Sarcophilus harrisii
NCBI taxonomy Id: 9305
Other names: S. harrisii, Sarcophilus laniarius, Tasmanian devil
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.